Overview of this BioProject:
Since 2007, bacterial canker caused by Pseudomonas syringae pv. actinidiae (Psa) has become a pandemic disease leading to important economic losses every country where kiwifruit are widely cultivated. To elucidate early molecular reaction of kiwifruit plants (Actinidia chinensis var. chinensis) to Psa infection, a RNAseq analysis was performed during the different phases of the infection process, from the epiphytic growth till the endophytic invasion.
Our work provides an in-depth description of the plant molecular reactions to Psa in the key steps of infection process and the genes related to ASM-induced resistance.These knowledges leading to a better understanding of kiwifruit defensive mechanisms provides robust tools for improving breeding for resistance and developing effective control strategies in open field.
Properties this BioBroject:
Property Name | Value |
Data type | Transcriptome or Gene expression |
Sample scope | Multi-species |
Material | Transcriptome |
Capture | RandomSurvey |
BioSamples of this BioProject:
BioSample | Organism | Description |
ASM | kiwifruit | treated with ASM and 15 days before the infection
; cultivar : chinensis; dev_stage : 15 days before the infection; tissue : all plant; treatment : 1.7mM Acibenzolar-S-methyl; ; |
ASMI3 | kiwifruit | treated with ASM and 3h post inoculation of Psa
; cultivar : chinensis; dev_stage : 3h post inoculation; tissue : all plant; treatment : 1.7mM Acibenzolar-S-methyl; Pseudomonas syringae pv. actinidiae (Psa; strain CFBP7286-GFPuv ) inoculation; |
ASMI24 | kiwifruit | treated with ASM and 24h post inoculation of Psa
; cultivar : chinensis; dev_stage : 24h post inoculation; tissue : all plant; treatment : 1.7mM Acibenzolar-S-methyl; Pseudomonas syringae pv. actinidiae (Psa; strain CFBP7286-GFPuv ) inoculation; |
ASMI48 | kiwifruit | treated with ASM and 48h post inoculation of Psa
; cultivar : chinensis; dev_stage : 48h post inoculation; tissue : all plant; treatment : 1.7mM Acibenzolar-S-methyl; Pseudomonas syringae pv. actinidiae (Psa; strain CFBP7286-GFPuv ) inoculation; |
HealtyControl | kiwifruit | healty plant as mock
; cultivar : chinensis; dev_stage : healty plant; tissue : all plant; treatment : mock-inoculated plants were immersed in sterile 10mM MgSO4; |
I3 | kiwifruit | 3h post inoculation of Psa
; cultivar : chinensis; dev_stage : 3h post inoculation; tissue : all plant; treatment : Pseudomonas syringae pv. actinidiae (Psa; strain CFBP7286-GFPuv ) inoculation; |
I24 | kiwifruit | 24h post inoculation of Psa
; cultivar : chinensis; dev_stage : 24h post inoculation; tissue : all plant; treatment : Pseudomonas syringae pv. actinidiae (Psa; strain CFBP7286-GFPuv ) inoculation; |
I48 | kiwifruit | 48h post inoculation of Psa
; cultivar : chinensis; dev_stage : 48h post inoculation; tissue : all plant; treatment : Pseudomonas syringae pv. actinidiae (Psa; strain CFBP7286-GFPuv ) inoculation; |